BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034G12LP1|AL429958
(857 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1045 1675 0.0
>3x_Contig1045
Length = 4304
Score = 1675 bits (841), Expect = 0.0
Identities = 850/857 (99%)
Strand = Plus / Minus
Query: 1 gatcttcacacatatctcccgcaaacaaggagacatcaaaaagcagtatatagaggtaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3787 gatcttcacacatatctcccgcaaacaaggagacatcaaaaagcagtatatagaggtaaa 3728
Query: 61 tmttatcgatcgtgaatgtataaatttacacatamactgaagctgttcataatggcaaam 120
| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3727 tcttatcgatcgtgaatgtataaatttacacatacactgaagctgttcataatggcaaac 3668
Query: 121 attacccggatttgagtattctaattgaaataaaacaatttcaactaataaamatcaaga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3667 attacccggatttgagtattctaattgaaataaaacaatttcaactaataaacatcaaga 3608
Query: 181 ataagattagatgagaatagctgttatcatcgtagcatgttcatatgcaccggtaamact 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3607 ataagattagatgagaatagctgttatcatcgtagcatgttcatatgcaccggtaacact 3548
Query: 241 gtggtttggtgtgttcttcaatttcaagtaggataaattgatcatttttgactgttgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3547 gtggtttggtgtgttcttcaatttcaagtaggataaattgatcatttttgactgttgaaa 3488
Query: 301 cattgttgagaaagcgaactgacaatcctaaatcatgagtacagtatttggccaacaagc 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3487 cattgttgagaaagcgaactgacaatcctaaatcatgagttcagtatttggccaacaagc 3428
Query: 361 gcaacaagagaacaggtttgcaaacttgcaaataaattatcctcagcagcagcagcaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3427 gcaacaagagaacaggtttgcaaacttgcaaataaattatcctcagcagcagcagcaaaa 3368
Query: 421 ccaacaacagcagaatagttcacaatcactagtacagagctctgccacgaatggaaagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3367 ccaacaacagcagaatagttcacaatcactagtacagagctctgccacgaatggaaagga 3308
Query: 481 agaaaactggtataatatagctagaaagagaaacattccacaatccgtgataaaaagatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3307 agaaaactggtataatatagctagaaagagaaacattccacaatccgtgataaaaagatc 3248
Query: 541 gtctaaaccgagctcatctggagatggatcttcgaatgacaactcttcccaaagatccgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3247 gtctaaaccgagctcatctggagatggatcttcgaatgacaactcttcccaaagatccgg 3188
Query: 601 attcaatagcgtccagtttggcacaaagaagccaacattcagctctacgcagcctgcaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3187 attcaatagcgtccagtttggcacaaagaagccaacattcagctctacgcagcctgcaca 3128
Query: 661 acctactgatatcgcgacttatgtggaatcgaatgaagctcccccaacaaaatcgttata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3127 acctactgatatcgcgacttatgtggaatcgaatgaagctcccccaacaaaatcgttata 3068
Query: 721 tgattggcaacgagaggatgagttcgggtctgtccccactaacgtgaacgcaatgccttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3067 tgattggcaacgagaggatgagttcgggtctgtccccactaacgtgaacgcaatgccttc 3008
Query: 781 gtctaamcaaatacctttgactcaagaatacactaagagcacaagaaacgcattcgacag 840
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3007 gtctaaccaaatacctttgactcaagaatacactaagagcacaagaaacgcattcgacag 2948
Query: 841 agatgcgtcgaaatccc 857
|||||||||||||||||
Sbjct: 2947 agatgcgtcgaaatccc 2931
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6497
Number of Sequences: 1807
Number of extensions: 6497
Number of successful extensions: 83
Number of sequences better than 1.0e-20: 1
length of query: 857
length of database: 10,358,551
effective HSP length: 16
effective length of query: 841
effective length of database: 10,329,639
effective search space: 8687226399
effective search space used: 8687226399
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)